WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00079869 Genotype  alp-1(tm1137)
Phenotype Remark  In the alp-1(tm1137) mutant background, ketn-1(RNAi) animals exhibit reduced thrashing.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E2.3e F54E2.3e 14670   V: 2782578-2782585
CDS:F54E2.3l F54E2.3l 9783   V: 2782578-2782585
CDS:F54E2.3k F54E2.3k 10194   V: 2782578-2782585
CDS:F54E2.3c F54E2.3c 12630   V: 2782578-2782585
CDS:F54E2.3g F54E2.3g 14892   V: 2782578-2782585
CDS:F54E2.3h F54E2.3h 14769   V: 2782578-2782585
CDS:F54E2.3a F54E2.3a 12753   V: 2782578-2782585
CDS:F54E2.3d F54E2.3d 12396   V: 2782578-2782585
CDS:F54E2.3f F54E2.3f 14547   V: 2782578-2782585
CDS:F54E2.3i F54E2.3i 12975   V: 2782578-2782585
CDS:F54E2.3j F54E2.3j 12852   V: 2782578-2782585

1 Laboratories

Primary Identifier
UU

3 Phenotype

Identifier Name Description
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).
WBPhenotype:0000273 thrashing reduced The number of body thrashes within an aqueous environment in a given period of time are reduced compared with control worms.
WBPhenotype:0001354 actin cytoskeleton filament morphology phenotype Animals exhibit variations in the form, structure, composition or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032968

0 Strain