WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54E2.3k Sequence Name  F54E2.3k
Length (nt)  10194   Chromosome Location  V: 2782578-2782585
Chromosome . Primary Identifier  V Chromosome Location . Start  2782578
Chromosome Location . End  2782585
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E2.3k

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51066 KETN-1, isoform k 377.8 3397 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00015632
WBRNAi00017435
WBRNAi00017446
WBRNAi00017447
WBRNAi00017448
WBRNAi00017449
WBRNAi00026030
WBRNAi00026031
WBRNAi00025633
WBRNAi00026028
WBRNAi00026029
WBRNAi00027365
WBRNAi00027427
WBRNAi00027428
WBRNAi00027429
WBRNAi00079869

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54E2.3k 2782578 2782585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54E2.3k 2782578 2782585 -1
CDS:F54E2.3k 2782844 2782970 -1
CDS:F54E2.3k 2783023 2783252 -1
CDS:F54E2.3k 2783366 2784113 -1
CDS:F54E2.3k 2784160 2784342 -1
CDS:F54E2.3k 2784836 2784958 -1
CDS:F54E2.3k 2785054 2792622 -1
CDS:F54E2.3k 2792670 2792873 -1
CDS:F54E2.3k 2792920 2793114 -1
CDS:F54E2.3k 2793907 2794011 -1
CDS:F54E2.3k 2794054 2794163 -1
CDS:F54E2.3k 2795251 2795497 -1
CDS:F54E2.3k 2795546 2795703 -1
CDS:F54E2.3k 2795751 2795937 -1

1 Sequence

Length
10194

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54E2.3k.1 F54E2.3k.1 10194   V: 2782578-2795937