WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101391 Genotype  geIn3 [sir-2.1 overexpression]; Pmyo-3::PABPN1-A13 (polyalanine expanded mutant of PABPN1 protein)::GFP [drives expression of nuclear localized GFP in body wall muscles]
Phenotype Remark  pop-1 RNAi suppressed the aggravated, progressive loss of nuclear PABPN1-A13::GFP in body wall muscles (an indicator of muscle cell decline) caused by sir-2.1 overexpression Remark  (Figure 4E) pop-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans
WBGene00220126 W10C8.17 W10C8.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
ID

2 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001292 body wall muscle physiology variant Animals exhibit variations in any physical or chemical process required for cells as a collective unit of the body wall muscle system to carry out their normal functions or activities or be able to perceive and respond to stimuli, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036044

0 Strain