WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04B2.2a Sequence Name  T04B2.2a
Length (nt)  1173   Chromosome Location  IV: 10044263-10044564
Chromosome . Primary Identifier  IV Chromosome Location . Start  10044263
Chromosome Location . End  10044564
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03609 FRK-1, isoform a 44.7 390 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00099030
WBRNAi00099028
WBRNAi00052351
WBRNAi00018119
WBRNAi00061009
WBRNAi00061010
WBRNAi00061011
WBRNAi00061012
WBRNAi00061013
WBRNAi00061014
WBRNAi00061015
WBRNAi00099033
WBRNAi00099034
WBRNAi00099037
WBRNAi00099036
WBRNAi00035124
WBRNAi00099038
WBRNAi00110391
WBRNAi00023569
WBRNAi00099039
WBRNAi00099041
WBRNAi00099042
WBRNAi00099044

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04B2.2a 10044263 10044564 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04B2.2a 10044263 10044564 1
CDS:T04B2.2a 10044644 10045133 1
CDS:T04B2.2a 10045218 10045598 1

1 Sequence

Length
1173

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04B2.2a.1 T04B2.2a.1 1412   IV: 10043181-10045739
Transcript:T04B2.2a.2 T04B2.2a.2 1398   IV: 10043812-10045739