WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53A3.4d Sequence Name  F53A3.4d
Length (nt)  1284   Chromosome Location  III: 1933265-1933302
Chromosome . Primary Identifier  III Chromosome Location . Start  1933265
Chromosome Location . End  1933302
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.4d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48496 PQN-41, isoform d 45.3 427 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00094305
WBRNAi00000837
WBRNAi00048054
WBRNAi00068802
WBRNAi00015456
WBRNAi00094020
WBRNAi00006980
WBRNAi00111492
WBRNAi00068740
WBRNAi00094421
WBRNAi00111490
WBRNAi00111491

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53A3.4d 1933265 1933302 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004128 pqn-41 F53A3.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53A3.4d 1933265 1933302 1
CDS:F53A3.4d 1934184 1934523 1
CDS:F53A3.4d 1936367 1936540 1
CDS:F53A3.4d 1937681 1938100 1
CDS:F53A3.4d 1939019 1939330 1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53A3.4d.1 F53A3.4d.1 3523   III: 1919571-1939568
Transcript:F53A3.4d.2 F53A3.4d.2 3201   III: 1927671-1939570
Transcript:F53A3.4d.3 F53A3.4d.3 3131   III: 1927675-1939555