WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110237 Genotype  zcIs13 [hsp-6p::GFP]; rmIs101 [rgef-1p::Q40::YFP]
Phenotype Remark  "We predicted that the cell-non-autonomous induction of mitochondrial chaperones observed with neuronal polyQ40 expression requires one or more essential UPRmt factors. To test this hypothesis, we applied RNAi against ubl-5, dve-1, atfs-1, and clpp-1, and cco-1 to neuronal polyQ40 worms expressing hsp-6p::GFP. RNAi against dve-1, atfs-1, and clpp-1 blocked the induction of the hsp-6p::GFP reporter in peripheral tissues, while cco-1 RNAi showed robust induction (Figures 2A and 2B)." Remark  (Figure 2A, 2B) dve-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022861 dve-1 ZK1193.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1193.5a ZK1193.5a 1407   X: 427687-427770
CDS:ZK1193.5c ZK1193.5c 783   X: 427687-427770
CDS:ZK1193.5e ZK1193.5e 1398   X: 427687-427770
CDS:ZK1193.5d ZK1193.5d 774   X: 427687-427770

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00050142

0 Strain