WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1193.5a Sequence Name  ZK1193.5a
Length (nt)  1407   Chromosome Location  X: 427687-427770
Chromosome . Primary Identifier  X Chromosome Location . Start  427687
Chromosome Location . End  427770
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1193.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33746 DVE-1, isoform a 52.8 468 Caenorhabditis elegans
 

Other

54 RNAi

WormBase ID
WBRNAi00095827
WBRNAi00009455
WBRNAi00084554
WBRNAi00107477
WBRNAi00059154
WBRNAi00105958
WBRNAi00108505
WBRNAi00092104
WBRNAi00084576
WBRNAi00092122
WBRNAi00093157
WBRNAi00092004
WBRNAi00093159
WBRNAi00093160
WBRNAi00093165
WBRNAi00064784
WBRNAi00093166
WBRNAi00093168
WBRNAi00110215
WBRNAi00093170
WBRNAi00107528
WBRNAi00093185
WBRNAi00064549
WBRNAi00110232
WBRNAi00093190
WBRNAi00110237
WBRNAi00107164
WBRNAi00093327
WBRNAi00107424
WBRNAi00093329

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1193.5a 427687 427770 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022861 dve-1 ZK1193.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1193.5a 427687 427770 -1
CDS:ZK1193.5a 427821 427999 -1
CDS:ZK1193.5a 428540 428687 -1
CDS:ZK1193.5a 428993 429292 -1
CDS:ZK1193.5a 429343 429505 -1
CDS:ZK1193.5a 431874 431983 -1
CDS:ZK1193.5a 432036 432150 -1
CDS:ZK1193.5a 432845 432971 -1
CDS:ZK1193.5a 433613 433793 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1193.5a.1 ZK1193.5a.1 2050   X: 427050-433799