WormMine: RNAi WBRNAi00078101

• WormBase ID: WBRNAi00078101
• Genotype: PD4743
• Phenotype Remark: Whereas 64 percent (n=76) of embryos from untreated hermaphrodites showed D+C cell expression of the reporter gene, only 9 percent (n=96) of embryos from pal-1 RNAi-treated hermaphrodites had GFP-positive cells. This demonstrates that PAL-1 is required for efficient JKL26 bodywall muscle expression in D+C lineages. Authors also show that the response of JKL26 reporters to PAL-1 activity is POP-1 dependent, either directly or indirectly.
• Remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene (C38D4.6a.1) used for curation. PD4743 contains four copies of an enh-1 subfragment (JKL26) that was bodywall muscle specific expression, a putative PAL-1-binding site, with the pes-10 basal promoter.

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Data Sets

• WormBaseAcedbConverter

1 Inhibits Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003912	pal-1	C38D4.6	Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:C38D4.6a	C38D4.6a	813	III: 4805211-4805253
CDS:C38D4.6c	C38D4.6c	669	III: 4805211-4805253
CDS:C38D4.6b	C38D4.6b	807	III: 4805211-4805253

1 Laboratories

Primary Identifier
KM

1 Phenotype

Identifier	Name	Description
WBPhenotype:0000717	gene expression variant	Variations in the processes that convert a gene's sequence into a mature gene product or products (proteins or RNA), compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author	Title	Year	Journal	Volume	Pages	PubMed ID
						WBPaper00032967

0 Strain