WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064546 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3a W02C12.3a 1497   IV: 4015759-4015929
CDS:W02C12.3b W02C12.3b 1500   IV: 4015759-4015929
CDS:W02C12.3c W02C12.3c 1575   IV: 4015759-4015929
CDS:W02C12.3f W02C12.3f 1422   IV: 4015759-4015929
CDS:W02C12.3i W02C12.3i 1422   IV: 4015759-4015929
CDS:W02C12.3j W02C12.3j 1347   IV: 4015759-4015929
CDS:W02C12.3g W02C12.3g 1314   IV: 4016569-4016784
CDS:W02C12.3d W02C12.3d 1395   IV: 4015759-4015929
CDS:W02C12.3e W02C12.3e 1320   IV: 4015759-4015929
CDS:W02C12.3h W02C12.3h 1086   IV: 4015759-4015929

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00035410