WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W02C12.3a Sequence Name  W02C12.3a
Length (nt)  1497   Chromosome Location  IV: 4015759-4015929
Chromosome . Primary Identifier  IV Chromosome Location . Start  4015759
Chromosome Location . End  4015929
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14416 HLH-30, isoform a 54.4 498 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00107856
WBRNAi00107857
WBRNAi00054582
WBRNAi00064546
WBRNAi00019502
WBRNAi00036182
WBRNAi00113228
WBRNAi00112998
WBRNAi00068687
WBRNAi00068688
WBRNAi00068689
WBRNAi00068690
WBRNAi00069061
WBRNAi00069062
WBRNAi00092586
WBRNAi00092722
WBRNAi00092723
WBRNAi00023334
WBRNAi00023847
WBRNAi00024135
WBRNAi00024199
WBRNAi00092007
WBRNAi00078258
WBRNAi00092720
WBRNAi00092721
WBRNAi00099119

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W02C12.3a 4015759 4015929 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W02C12.3a 4015759 4015929 -1
CDS:W02C12.3a 4016492 4016568 -1
CDS:W02C12.3a 4016634 4016784 -1
CDS:W02C12.3a 4016834 4017122 -1
CDS:W02C12.3a 4017559 4017634 -1
CDS:W02C12.3a 4017693 4017837 -1
CDS:W02C12.3a 4018033 4018161 -1
CDS:W02C12.3a 4018257 4018331 -1
CDS:W02C12.3a 4018487 4018582 -1
CDS:W02C12.3a 4018694 4018981 -1

1 Sequence

Length
1497

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W02C12.3a.2 W02C12.3a.2 2514   IV: 4014800-4019039
Transcript:W02C12.3a.1 W02C12.3a.1 2517   IV: 4014800-4019042