WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00016202 Secondary Identifier  JA:H05O09.1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8f W06H8.8f 45567   V: 6121577-6121636
CDS:W06H8.8g W06H8.8g 44289   V: 6121577-6121636
CDS:W06H8.8h W06H8.8h 45522   V: 6121577-6121636
CDS:W06H8.8i W06H8.8i 44244   V: 6121577-6121636
CDS:W06H8.8d W06H8.8d 45438   V: 6121593-6121636
CDS:W06H8.8e W06H8.8e 44160   V: 6121593-6121636
CDS:W06H8.8b W06H8.8b 44205   V: 6121593-6121636
CDS:W06H8.8a W06H8.8a 45483   V: 6121593-6121636

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain