WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W06H8.8f Sequence Name  W06H8.8f
Length (nt)  45567   Chromosome Location  V: 6121577-6121636
Chromosome . Primary Identifier  V Chromosome Location . Start  6121577
Chromosome Location . End  6121636
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52428 TTN-1, isoform f 1682.5 15188 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00000642
WBRNAi00044447
WBRNAi00049307
WBRNAi00054919
WBRNAi00054924
WBRNAi00055979
WBRNAi00013166
WBRNAi00013167
WBRNAi00016202
WBRNAi00019682
WBRNAi00020251
WBRNAi00080561
WBRNAi00036825
WBRNAi00092181

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W06H8.8f 6121577 6121636 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans

59 Locations


Feature . Primary Identifier
Start End Strand
CDS:W06H8.8f 6121577 6121636 -1
CDS:W06H8.8f 6121683 6121750 -1
CDS:W06H8.8f 6121812 6121958 -1
CDS:W06H8.8f 6122005 6122084 -1
CDS:W06H8.8f 6122133 6122198 -1
CDS:W06H8.8f 6122247 6122386 -1
CDS:W06H8.8f 6122431 6122603 -1
CDS:W06H8.8f 6122651 6122759 -1
CDS:W06H8.8f 6122810 6122972 -1
CDS:W06H8.8f 6123038 6123099 -1
CDS:W06H8.8f 6123145 6123262 -1
CDS:W06H8.8f 6123307 6123413 -1
CDS:W06H8.8f 6123465 6123575 -1
CDS:W06H8.8f 6123642 6123725 -1
CDS:W06H8.8f 6123771 6129184 -1
CDS:W06H8.8f 6129229 6129400 -1
CDS:W06H8.8f 6129492 6129536 -1
CDS:W06H8.8f 6129584 6130666 -1
CDS:W06H8.8f 6130915 6131049 -1
CDS:W06H8.8f 6133050 6133172 -1
CDS:W06H8.8f 6134453 6134523 -1
CDS:W06H8.8f 6144022 6144180 -1
CDS:W06H8.8f 6144360 6144575 -1
CDS:W06H8.8f 6144977 6149321 -1
CDS:W06H8.8f 6149443 6149676 -1
CDS:W06H8.8f 6149891 6153688 -1
CDS:W06H8.8f 6153899 6154012 -1
CDS:W06H8.8f 6154121 6154800 -1
CDS:W06H8.8f 6161647 6161691 -1
CDS:W06H8.8f 6164440 6164941 -1

1 Sequence

Length
45567

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06H8.8f.1 W06H8.8f.1 45874   V: 6121270-6202533