WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098158 Genotype  vhl-1(ok161)
Remark  (Figure S6a) Y59A8B.19 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00219558 anr-12 C01B9.8 Caenorhabditis elegans
WBGene00194890 C01B9.4 C01B9.4 Caenorhabditis elegans
WBGene00013351 Y59A8B.19 Y59A8B.19 Caenorhabditis elegans
WBGene00045459 Y59A8B.26 Y59A8B.26 Caenorhabditis elegans
WBGene00013064 clec-248 Y51A2A.11 Caenorhabditis elegans
WBGene00013063 clec-249 Y51A2A.7 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B9.4 C01B9.4 150   II: 13770921-13770988
CDS:Y59A8B.26b Y59A8B.26b 543   V: 18010017-18010159
CDS:Y51A2A.7 Y51A2A.7 345   V: 18305181-18305336
CDS:Y51A2A.11 Y51A2A.11 345   V: 18294359-18294547
CDS:Y59A8B.19 Y59A8B.19 543   V: 18007230-18007349
CDS:Y59A8B.26a Y59A8B.26a 777   V: 18010017-18010673

1 Laboratories

Primary Identifier
WS

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000712 germ cell ionizing radiation response variant Germ cells exhibit variations in their response to ionizing radiation compared to that observed in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036343

0 Strain