WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077516 Genotype  hsd-1(mg433); ncr-1(nr2022)
Phenotype Remark  The addition of daf-12 RNAi almost completely suppresses the strong dauer arrest phenotype of the hsd-1; ncr-1 double mutant. Without RNAi approximately 98 percent of the double mutants are arrested at 25C, with the addition of daf-12 RNAi only approximately 2 percent are arrested at 25C. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. F11A1.3a (daf-12 spliced coding region)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A1.3g F11A1.3g 2214   X: 10644440-10644550
CDS:F11A1.3a F11A1.3a 2262   X: 10644440-10644550
CDS:F11A1.3f F11A1.3f 2112   X: 10659692-10659760
CDS:F11A1.3d F11A1.3d 2160   X: 10659692-10659760
CDS:F11A1.3e F11A1.3e 2037   X: 10660802-10660868
CDS:F11A1.3b F11A1.3b 2085   X: 10660802-10660868
CDS:F11A1.3c F11A1.3c 804   X: 10664406-10664585

1 Laboratories

Primary Identifier
FW

1 Phenotype

Identifier Name Description
WBPhenotype:0000308 dauer development phenotype Any variation in the processes that govern development of the dauer larva, a developmentally arrested, larval stage that is specialized for survival under harsh, or otherwise unfavorable, environmental conditions. In C. elegans this is an alternative third larval stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031897

0 Strain