WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11A1.3e Sequence Name  F11A1.3e
Length (nt)  2037   Chromosome Location  X: 10660802-10660868
Chromosome . Primary Identifier  X Chromosome Location . Start  10660802
Chromosome Location . End  10660868
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A1.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54230 DAF-12, isoform e 75.7 678 Caenorhabditis elegans
 

Other

35 RNAi

WormBase ID
WBRNAi00067921
WBRNAi00013096
WBRNAi00025073
WBRNAi00025074
WBRNAi00084742
WBRNAi00087794
WBRNAi00084747
WBRNAi00084745
WBRNAi00084752
WBRNAi00084753
WBRNAi00106468
WBRNAi00027886
WBRNAi00027272
WBRNAi00106472
WBRNAi00086614
WBRNAi00106476
WBRNAi00077530
WBRNAi00106477
WBRNAi00106481
WBRNAi00101960
WBRNAi00102715
WBRNAi00086607
WBRNAi00086606
WBRNAi00077516
WBRNAi00092846
WBRNAi00023188
WBRNAi00023409
WBRNAi00023700
WBRNAi00023988
WBRNAi00102714

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11A1.3e 10660802 10660868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11A1.3e 10660802 10660868 1
CDS:F11A1.3e 10661303 10661385 1
CDS:F11A1.3e 10661433 10661555 1
CDS:F11A1.3e 10661601 10661867 1
CDS:F11A1.3e 10661934 10661981 1
CDS:F11A1.3e 10662030 10662101 1
CDS:F11A1.3e 10662795 10662890 1
CDS:F11A1.3e 10663250 10663324 1
CDS:F11A1.3e 10663660 10663757 1
CDS:F11A1.3e 10663807 10663913 1
CDS:F11A1.3e 10663962 10664158 1
CDS:F11A1.3e 10664406 10664585 1
CDS:F11A1.3e 10664630 10664922 1
CDS:F11A1.3e 10664970 10665131 1
CDS:F11A1.3e 10665178 10665253 1
CDS:F11A1.3e 10665389 10665481 1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11A1.3e.3 F11A1.3e.3 3817   X: 10635908-10666875
Transcript:F11A1.3e.1 F11A1.3e.1 3636   X: 10644409-10666872
Transcript:F11A1.3e.4 F11A1.3e.4 3592   X: 10647057-10666875
Transcript:F11A1.3e.2 F11A1.3e.2 3859   X: 10659339-10666875