WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092720 Genotype  ftn-1(full length promoter)::GFP
Phenotype Remark  hlh-30 RNAi resulted in a decrease in expression of GFP under control of the full length ftn-1 promoter (3903 bp upstream of ftn-1 start codon) Remark  (Figure 5D) hlh-30 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3a W02C12.3a 1497   IV: 4015759-4015929
CDS:W02C12.3b W02C12.3b 1500   IV: 4015759-4015929
CDS:W02C12.3c W02C12.3c 1575   IV: 4015759-4015929
CDS:W02C12.3f W02C12.3f 1422   IV: 4015759-4015929
CDS:W02C12.3i W02C12.3i 1422   IV: 4015759-4015929
CDS:W02C12.3j W02C12.3j 1347   IV: 4015759-4015929
CDS:W02C12.3g W02C12.3g 1314   IV: 4016569-4016784
CDS:W02C12.3d W02C12.3d 1395   IV: 4015759-4015929
CDS:W02C12.3e W02C12.3e 1320   IV: 4015759-4015929
CDS:W02C12.3h W02C12.3h 1086   IV: 4015759-4015929

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042178

0 Strain