WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00094973 Genotype  cdc-48.2(tm659); dpy-5(e907); sIs13872[ckb-2p::gfp, pCeh361]
Phenotype Remark  RNAi suppressed the reduction of ckb-2p::GFP expression resulting from the cdc-48.2(tm659) mutation, in a tunicamycin-dependent manner Remark  (Table S4) Y42G9A.4 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans

18 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4a Y42G9A.4a 1824   III: 6124845-6125020
CDS:Y42G9A.4b Y42G9A.4b 1845   III: 6124845-6125020
CDS:Y42G9A.4c Y42G9A.4c 1455   III: 6124845-6125020
CDS:Y42G9A.4m Y42G9A.4m 2124   III: 6124845-6125020
CDS:Y42G9A.4r Y42G9A.4r 225   III: 6124845-6125020
CDS:Y42G9A.4q Y42G9A.4q 495   III: 6124845-6125020
CDS:Y42G9A.4o Y42G9A.4o 1518   III: 6124845-6125020
CDS:Y42G9A.4p Y42G9A.4p 1734   III: 6124845-6125020
CDS:Y42G9A.4l Y42G9A.4l 1908   III: 6124845-6125020
CDS:Y42G9A.4h Y42G9A.4h 1608   III: 6124845-6125020
CDS:Y42G9A.4d Y42G9A.4d 1545   III: 6124845-6125020
CDS:Y42G9A.4e Y42G9A.4e 2214   III: 6124845-6125020
CDS:Y42G9A.4f Y42G9A.4f 1887   III: 6124845-6125020
CDS:Y42G9A.4g Y42G9A.4g 1935   III: 6124845-6125020
CDS:Y42G9A.4i Y42G9A.4i 2151   III: 6124845-6125020
CDS:Y42G9A.4j Y42G9A.4j 1872   III: 6124845-6125020
CDS:Y42G9A.4k Y42G9A.4k 2187   III: 6124845-6125020
CDS:Y42G9A.4n Y42G9A.4n 1797   III: 6124845-6125020

1 Laboratories

Primary Identifier
DUD

1 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046421

0 Strain