WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y42G9A.4b Sequence Name  Y42G9A.4b
Length (nt)  1845   Chromosome Location  III: 6124845-6125020
Chromosome . Primary Identifier  III Chromosome Location . Start  6124845
Chromosome Location . End  6125020
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37427 MVK-1, isoform b 66.1 614 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00070328
WBRNAi00009327
WBRNAi00056438
WBRNAi00026700
WBRNAi00090860
WBRNAi00037023
WBRNAi00070326
WBRNAi00070325
WBRNAi00070327
WBRNAi00094973
WBRNAi00116423

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.4b 6124845 6125020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.4b 6124845 6125020 -1
CDS:Y42G9A.4b 6125493 6125646 -1
CDS:Y42G9A.4b 6126670 6126804 -1
CDS:Y42G9A.4b 6127038 6127097 -1
CDS:Y42G9A.4b 6127610 6127823 -1
CDS:Y42G9A.4b 6127873 6127921 -1
CDS:Y42G9A.4b 6129342 6129468 -1
CDS:Y42G9A.4b 6129912 6130050 -1
CDS:Y42G9A.4b 6130781 6131085 -1
CDS:Y42G9A.4b 6131587 6131747 -1
CDS:Y42G9A.4b 6132778 6133102 -1

1 Sequence

Length
1845

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y42G9A.4b.1 Y42G9A.4b.1 2543   III: 6124149-6133104
Transcript:Y42G9A.4b.2 Y42G9A.4b.2 2707   III: 6124149-6136278