WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y42G9A.4r Sequence Name  Y42G9A.4r
Length (nt)  225   Chromosome Location  III: 6124845-6125020
Chromosome . Primary Identifier  III Chromosome Location . Start  6124845
Chromosome Location . End  6125020
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4r

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54454 MVK-1, isoform r 7.8 74 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00037023
WBRNAi00094973

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.4r 6124845 6125020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.4r 6124845 6125020 -1
CDS:Y42G9A.4r 6125493 6125541 -1

1 Sequence

Length
225

1 Sequence Ontology Term

Identifier Name Description
CDS  

11 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y42G9A.4r.11 Y42G9A.4r.11 1283   III: 6124041-6126818
Transcript:Y42G9A.4r.2 Y42G9A.4r.2 2547   III: 6124045-6136278
Transcript:Y42G9A.4r.9 Y42G9A.4r.9 2424   III: 6124060-6131086
Transcript:Y42G9A.4r.3 Y42G9A.4r.3 2801   III: 6124070-6136278
Transcript:Y42G9A.4r.4 Y42G9A.4r.4 2980   III: 6124155-6136278
Transcript:Y42G9A.4r.7 Y42G9A.4r.7 2290   III: 6124160-6136271
Transcript:Y42G9A.4r.8 Y42G9A.4r.8 2344   III: 6124171-6131753
Transcript:Y42G9A.4r.5 Y42G9A.4r.5 2223   III: 6124171-6136278
Transcript:Y42G9A.4r.10 Y42G9A.4r.10 1195   III: 6124178-6127100
Transcript:Y42G9A.4r.6 Y42G9A.4r.6 3019   III: 6124179-6136278
Transcript:Y42G9A.4r.1 Y42G9A.4r.1 2328   III: 6124316-6131747