WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G1BR.1 Sequence Name  Y48G1BR.1
Length (nt)  1644   Chromosome Location  I: 254709-254802
Chromosome . Primary Identifier  I Chromosome Location . Start  254709
Chromosome Location . End  254802
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1BR.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49441 Y48G1BR.1 59.8 547 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056941
WBRNAi00056950
WBRNAi00056951
WBRNAi00004681
WBRNAi00004689

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G1BR.1 254709 254802 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021675 Y48G1BR.1 Y48G1BR.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G1BR.1 254709 254802 -1
CDS:Y48G1BR.1 254976 255079 -1
CDS:Y48G1BR.1 255195 255325 -1
CDS:Y48G1BR.1 255370 255446 -1
CDS:Y48G1BR.1 255818 255960 -1
CDS:Y48G1BR.1 256316 256643 -1
CDS:Y48G1BR.1 257418 257661 -1
CDS:Y48G1BR.1 258021 258358 -1
CDS:Y48G1BR.1 258548 258683 -1
CDS:Y48G1BR.1 259107 259155 -1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G1BR.1.1 Y48G1BR.1.1 2101   I: 254254-259157