WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53D5.4b Sequence Name  C53D5.4b
Length (nt)  906   Chromosome Location  I: 286352-286420
Chromosome . Primary Identifier  I Chromosome Location . Start  286352
Chromosome Location . End  286420
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28215 ZTF-3, isoform b 34.5 301 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00043095
WBRNAi00003216
WBRNAi00024895
WBRNAi00024897
WBRNAi00030116
WBRNAi00002107
WBRNAi00024896

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53D5.4b 286352 286420 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016905 ztf-3 C53D5.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53D5.4b 286352 286420 -1
CDS:C53D5.4b 287509 288003 -1
CDS:C53D5.4b 288558 288644 -1
CDS:C53D5.4b 288750 288902 -1
CDS:C53D5.4b 288973 289074 -1

1 Sequence

Length
906

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53D5.4b.1 C53D5.4b.1 1281   I: 286088-289185