WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4BR.4a.1 Sequence Name  Y65B4BR.4a.1
Length (nt)  2974   Chromosome Location  I: 537122-542204
Chromosome . Primary Identifier  I Chromosome Location . Start  537122
Chromosome Location . End  542204 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007009 wwp-1 Y65B4BR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BR.4a Y65B4BR.4a 2385   I: 537138-537243

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BR.4a.1 537122 542204 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1042   122   I: 537122-537243 Caenorhabditis elegans
Exon1043   258   I: 537303-537560 Caenorhabditis elegans
Exon1045   230   I: 537606-537835 Caenorhabditis elegans
Exon1047   210   I: 538702-538911 Caenorhabditis elegans
Exon1050   275   I: 539453-539727 Caenorhabditis elegans
Exon1054   214   I: 539795-540008 Caenorhabditis elegans
Exon1058   321   I: 540064-540384 Caenorhabditis elegans
Exon1062   261   I: 540723-540983 Caenorhabditis elegans
Exon1066   222   I: 541064-541285 Caenorhabditis elegans
Exon1073   861   I: 541344-542204 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BR.4a.1 537122 542204 1

1 Sequence

Length
2974

1 Sequence Ontology Term

Identifier Name Description
transcript