WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y65B4BR.4a Sequence Name  Y65B4BR.4a
Length (nt)  2385   Chromosome Location  I: 537138-537243
Chromosome . Primary Identifier  I Chromosome Location . Start  537138
Chromosome Location . End  537243
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31384 WWP-1, isoform a 90.9 794 Caenorhabditis elegans
 

Other

51 RNAi

WormBase ID
WBRNAi00070571
WBRNAi00094723
WBRNAi00106580
WBRNAi00066070
WBRNAi00098733
WBRNAi00098734
WBRNAi00057914
WBRNAi00004766
WBRNAi00004767
WBRNAi00004768
WBRNAi00093401
WBRNAi00076836
WBRNAi00098225
WBRNAi00097195
WBRNAi00084977
WBRNAi00080593
WBRNAi00098735
WBRNAi00098736
WBRNAi00037709
WBRNAi00061572
WBRNAi00116641
WBRNAi00062079
WBRNAi00108667
WBRNAi00108592
WBRNAi00060814
WBRNAi00060815
WBRNAi00060817
WBRNAi00060816
WBRNAi00060818
WBRNAi00060819

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y65B4BR.4a 537138 537243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007009 wwp-1 Y65B4BR.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y65B4BR.4a 537138 537243 1
CDS:Y65B4BR.4a 537303 537560 1
CDS:Y65B4BR.4a 537606 537835 1
CDS:Y65B4BR.4a 538702 538911 1
CDS:Y65B4BR.4a 539453 539727 1
CDS:Y65B4BR.4a 539795 540008 1
CDS:Y65B4BR.4a 540064 540384 1
CDS:Y65B4BR.4a 540723 540983 1
CDS:Y65B4BR.4a 541064 541285 1
CDS:Y65B4BR.4a 541344 541631 1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y65B4BR.4a.1 Y65B4BR.4a.1 2974   I: 537122-542204