WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56A6.1a Sequence Name  F56A6.1a
Length (nt)  2664   Chromosome Location  I: 618207-618357
Chromosome . Primary Identifier  I Chromosome Location . Start  618207
Chromosome Location . End  618357
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A6.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25906 SAGO-2, isoform a 99.5 887 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00095808
WBRNAi00040942
WBRNAi00040943
WBRNAi00002990
WBRNAi00003806
WBRNAi00021245
WBRNAi00037701
WBRNAi00061632

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56A6.1a 618207 618357 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018921 sago-2 F56A6.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56A6.1a 618207 618357 1
CDS:F56A6.1a 618415 618668 1
CDS:F56A6.1a 618713 618912 1
CDS:F56A6.1a 618959 619018 1
CDS:F56A6.1a 619069 619187 1
CDS:F56A6.1a 619247 619689 1
CDS:F56A6.1a 619738 620024 1
CDS:F56A6.1a 620070 620466 1
CDS:F56A6.1a 620513 621168 1
CDS:F56A6.1a 621215 621311 1

1 Sequence

Length
2664

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56A6.1a.1 F56A6.1a.1 2890   I: 618160-621490