WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y18H1A.3e Sequence Name  Y18H1A.3e
Length (nt)  3921   Chromosome Location  I: 700634-700786
Chromosome . Primary Identifier  I Chromosome Location . Start  700634
Chromosome Location . End  700786
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49164 HGAP-1, isoform e 145.5 1306 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055627
WBRNAi00004557

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y18H1A.3e 700634 700786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021209 hgap-1 Y18H1A.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y18H1A.3e 700634 700786 -1
CDS:Y18H1A.3e 701756 701863 -1
CDS:Y18H1A.3e 702249 703985 -1
CDS:Y18H1A.3e 704419 704550 -1
CDS:Y18H1A.3e 706419 706664 -1
CDS:Y18H1A.3e 707946 708270 -1
CDS:Y18H1A.3e 710039 710265 -1
CDS:Y18H1A.3e 711731 711995 -1
CDS:Y18H1A.3e 713216 713648 -1
CDS:Y18H1A.3e 715474 715642 -1
CDS:Y18H1A.3e 715725 715850 -1

1 Sequence

Length
3921

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y18H1A.3e.1 Y18H1A.3e.1 3946   I: 700634-715875