WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.1a.1 Sequence Name  Y95B8A.1a.1
Length (nt)  2535   Chromosome Location  I: 938483-947710
Chromosome . Primary Identifier  I Chromosome Location . Start  938483
Chromosome Location . End  947710 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003548 nas-30 Y95B8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.1a Y95B8A.1a 2226   I: 938625-938675

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.1a.1 938483 947710 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1842   193   I: 938483-938675 Caenorhabditis elegans
Exon1844   87   I: 940221-940307 Caenorhabditis elegans
Exon1846   72   I: 940512-940583 Caenorhabditis elegans
Exon1848   130   I: 941232-941361 Caenorhabditis elegans
Exon1852   308   I: 943666-943973 Caenorhabditis elegans
Exon1853   156   I: 944027-944182 Caenorhabditis elegans
Exon1854   113   I: 944230-944342 Caenorhabditis elegans
Exon1855   234   I: 945230-945463 Caenorhabditis elegans
Exon1856   67   I: 945512-945578 Caenorhabditis elegans
Exon1857   204   I: 945631-945834 Caenorhabditis elegans
Exon1858   127   I: 945887-946013 Caenorhabditis elegans
Exon1861   129   I: 946220-946348 Caenorhabditis elegans
Exon1862   211   I: 946398-946608 Caenorhabditis elegans
Exon1863   110   I: 947157-947266 Caenorhabditis elegans
Exon1864   394   I: 947317-947710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.1a.1 938483 947710 1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
transcript