WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AR.1a.1 Sequence Name  Y48G8AR.1a.1
Length (nt)  2981   Chromosome Location  I: 1258201-1268155
Chromosome . Primary Identifier  I Chromosome Location . Start  1258201
Chromosome Location . End  1268155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AR.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001707 grh-1 Y48G8AR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AR.1a Y48G8AR.1a 1692   I: 1259489-1259671

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AR.1a.1 1258201 1268155 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2361   1471   I: 1258201-1259671 Caenorhabditis elegans
Exon2364   119   I: 1262352-1262470 Caenorhabditis elegans
Exon2367   228   I: 1262927-1263154 Caenorhabditis elegans
Exon2372   58   I: 1264180-1264237 Caenorhabditis elegans
Exon2373   156   I: 1264757-1264912 Caenorhabditis elegans
Exon2375   210   I: 1265422-1265631 Caenorhabditis elegans
Exon2377   163   I: 1266270-1266432 Caenorhabditis elegans
Exon2380   576   I: 1267580-1268155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AR.1a.1 1258201 1268155 -1

1 Sequence

Length
2981

1 Sequence Ontology Term

Identifier Name Description
transcript