WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G8AR.1a Sequence Name  Y48G8AR.1a
Length (nt)  1692   Chromosome Location  I: 1259489-1259671
Chromosome . Primary Identifier  I Chromosome Location . Start  1259489
Chromosome Location . End  1259671
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AR.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34614 GRH-1, isoform a 64.0 563 Caenorhabditis elegans
 

Other

43 RNAi

WormBase ID
WBRNAi00114269
WBRNAi00114034
WBRNAi00114113
WBRNAi00114192
WBRNAi00056974
WBRNAi00026776
WBRNAi00004691
WBRNAi00095185
WBRNAi00026777
WBRNAi00113996
WBRNAi00114075
WBRNAi00114154
WBRNAi00114233
WBRNAi00115668
WBRNAi00116063
WBRNAi00116530
WBRNAi00104882
WBRNAi00104864
WBRNAi00104863
WBRNAi00104866
WBRNAi00104865
WBRNAi00104868
WBRNAi00104867
WBRNAi00104870
WBRNAi00104869
WBRNAi00104872
WBRNAi00104871
WBRNAi00104874
WBRNAi00104873
WBRNAi00104876

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AR.1a 1259489 1259671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001707 grh-1 Y48G8AR.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AR.1a 1259489 1259671 -1
CDS:Y48G8AR.1a 1262352 1262470 -1
CDS:Y48G8AR.1a 1262927 1263154 -1
CDS:Y48G8AR.1a 1264180 1264237 -1
CDS:Y48G8AR.1a 1264757 1264912 -1
CDS:Y48G8AR.1a 1265422 1265631 -1
CDS:Y48G8AR.1a 1266270 1266432 -1
CDS:Y48G8AR.1a 1267580 1268154 -1

1 Sequence

Length
1692

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G8AR.1a.1 Y48G8AR.1a.1 2981   I: 1258201-1268155