WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.11a.1 Sequence Name  Y71G12B.11a.1
Length (nt)  8087   Chromosome Location  I: 1721592-1740692
Chromosome . Primary Identifier  I Chromosome Location . Start  1721592
Chromosome Location . End  1740692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.11a Y71G12B.11a 7662   I: 1721597-1721729

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.11a.1 1721592 1740692 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3001   138   I: 1721592-1721729 Caenorhabditis elegans
Exon3002   550   I: 1721910-1722459 Caenorhabditis elegans
Exon3004   392   I: 1725047-1725438 Caenorhabditis elegans
Exon3006   461   I: 1726666-1727126 Caenorhabditis elegans
Exon3010   614   I: 1728205-1728818 Caenorhabditis elegans
Exon3015   757   I: 1730817-1731573 Caenorhabditis elegans
Exon3023   74   I: 1733297-1733370 Caenorhabditis elegans
Exon3027   4081   I: 1734447-1738527 Caenorhabditis elegans
Exon3036   384   I: 1738827-1739210 Caenorhabditis elegans
Exon3045   636   I: 1740057-1740692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.11a.1 1721592 1740692 1

1 Sequence

Length
8087

1 Sequence Ontology Term

Identifier Name Description
transcript