WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71G12A.2b Sequence Name  Y71G12A.2b
Length (nt)  3339   Chromosome Location  I: 1895235-1895304
Chromosome . Primary Identifier  I Chromosome Location . Start  1895235
Chromosome Location . End  1895304
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12A.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46794 TRPP-10, isoform b 126.4 1112 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057159
WBRNAi00058191
WBRNAi00037786
WBRNAi00117119

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71G12A.2b 1895235 1895304 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022138 trpp-10 Y71G12A.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71G12A.2b 1895235 1895304 1
CDS:Y71G12A.2b 1895356 1895437 1
CDS:Y71G12A.2b 1895498 1895696 1
CDS:Y71G12A.2b 1896475 1896777 1
CDS:Y71G12A.2b 1899028 1899426 1
CDS:Y71G12A.2b 1902510 1902898 1
CDS:Y71G12A.2b 1904345 1904602 1
CDS:Y71G12A.2b 1906018 1906240 1
CDS:Y71G12A.2b 1908199 1908505 1
CDS:Y71G12A.2b 1910215 1910468 1
CDS:Y71G12A.2b 1917034 1917128 1
CDS:Y71G12A.2b 1917750 1918231 1
CDS:Y71G12A.2b 1919230 1919339 1
CDS:Y71G12A.2b 1922785 1922952 1

1 Sequence

Length
3339

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71G12A.2b.1 Y71G12A.2b.1 3686   I: 1895176-1923240