WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E3.5d.1 Sequence Name  Y37E3.5d.1
Length (nt)  1192   Chromosome Location  I: 2065698-2069098
Chromosome . Primary Identifier  I Chromosome Location . Start  2065698
Chromosome Location . End  2069098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E3.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021349 arl-13 Y37E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E3.5d Y37E3.5d 558   I: 2068390-2068452

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.5d.1 2065698 2069098 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3488   119   I: 2065698-2065816 Caenorhabditis elegans
Exon3495   71   I: 2066704-2066774 Caenorhabditis elegans
Exon3499   137   I: 2066835-2066971 Caenorhabditis elegans
Exon3503   63   I: 2067176-2067238 Caenorhabditis elegans
Exon3509   108   I: 2068038-2068145 Caenorhabditis elegans
Exon3514   54   I: 2068257-2068310 Caenorhabditis elegans
Exon3518   96   I: 2068357-2068452 Caenorhabditis elegans
Exon3523   323   I: 2068505-2068827 Caenorhabditis elegans
Exon3529   221   I: 2068878-2069098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.5d.1 2065698 2069098 1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript