WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03F11.6d Sequence Name  W03F11.6d
Length (nt)  4689   Chromosome Location  I: 2160071-2160199
Chromosome . Primary Identifier  I Chromosome Location . Start  2160071
Chromosome Location . End  2160199
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F11.6d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49670 AFD-1, isoform d 173.5 1562 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00068218
WBRNAi00054695
WBRNAi00004400
WBRNAi00004588
WBRNAi00004589
WBRNAi00004590
WBRNAi00004591
WBRNAi00036954
WBRNAi00116565

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03F11.6d 2160071 2160199 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021009 afd-1 W03F11.6 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03F11.6d 2160071 2160199 1
CDS:W03F11.6d 2163018 2163290 1
CDS:W03F11.6d 2164019 2164103 1
CDS:W03F11.6d 2164827 2164985 1
CDS:W03F11.6d 2165976 2166130 1
CDS:W03F11.6d 2172004 2172170 1
CDS:W03F11.6d 2173754 2173866 1
CDS:W03F11.6d 2173925 2174022 1
CDS:W03F11.6d 2174889 2174984 1
CDS:W03F11.6d 2185739 2185918 1
CDS:W03F11.6d 2186631 2186713 1
CDS:W03F11.6d 2192844 2192905 1
CDS:W03F11.6d 2195399 2196666 1
CDS:W03F11.6d 2197189 2197284 1
CDS:W03F11.6d 2200010 2200149 1
CDS:W03F11.6d 2201730 2202168 1
CDS:W03F11.6d 2203574 2203864 1
CDS:W03F11.6d 2205213 2205308 1
CDS:W03F11.6d 2207320 2207838 1
CDS:W03F11.6d 2209094 2209333 1

1 Sequence

Length
4689

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03F11.6d.1 W03F11.6d.1 5021   I: 2160038-2209632