WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03F11.6b Sequence Name  W03F11.6b
Length (nt)  2037   Chromosome Location  I: 2197988-2198011
Chromosome . Primary Identifier  I Chromosome Location . Start  2197988
Chromosome Location . End  2198011
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F11.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26730 AFD-1, isoform b 73.4 678 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00068218
WBRNAi00004400
WBRNAi00116565

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03F11.6b 2197988 2198011 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021009 afd-1 W03F11.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03F11.6b 2197988 2198011 1
CDS:W03F11.6b 2200010 2200149 1
CDS:W03F11.6b 2201730 2202168 1
CDS:W03F11.6b 2203574 2203864 1
CDS:W03F11.6b 2204925 2205308 1
CDS:W03F11.6b 2207320 2207838 1
CDS:W03F11.6b 2209094 2209333 1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03F11.6b.1 W03F11.6b.1 2037   I: 2197988-2209333