WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.25.1 Sequence Name  Y39G10AR.25.1
Length (nt)  647   Chromosome Location  I: 2352835-2356238
Chromosome . Primary Identifier  I Chromosome Location . Start  2352835
Chromosome Location . End  2356238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.25.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077563 peel-1 Y39G10AR.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.25 Y39G10AR.25 525   I: 2352874-2352883

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.25.1 2352835 2356238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4284   49   I: 2352835-2352883 Caenorhabditis elegans
Exon4285   87   I: 2354530-2354616 Caenorhabditis elegans
Exon4287   114   I: 2354667-2354780 Caenorhabditis elegans
Exon4289   129   I: 2355574-2355702 Caenorhabditis elegans
Exon4292   268   I: 2355971-2356238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.25.1 2352835 2356238 1

1 Sequence

Length
647

1 Sequence Ontology Term

Identifier Name Description
transcript