WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.18a Sequence Name  Y39G10AR.18a
Length (nt)  2841   Chromosome Location  I: 2384591-2384991
Chromosome . Primary Identifier  I Chromosome Location . Start  2384591
Chromosome Location . End  2384991
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.18a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38003 DOT-1.1, isoform a 103.2 946 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056271
WBRNAi00004586
WBRNAi00117100

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.18a 2384591 2384991 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021474 dot-1.1 Y39G10AR.18 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.18a 2384591 2384991 -1
CDS:Y39G10AR.18a 2388157 2388778 -1
CDS:Y39G10AR.18a 2389883 2389959 -1
CDS:Y39G10AR.18a 2390884 2391160 -1
CDS:Y39G10AR.18a 2392472 2392708 -1
CDS:Y39G10AR.18a 2396104 2396250 -1
CDS:Y39G10AR.18a 2396306 2396412 -1
CDS:Y39G10AR.18a 2397636 2397679 -1
CDS:Y39G10AR.18a 2397729 2397935 -1
CDS:Y39G10AR.18a 2399182 2399390 -1
CDS:Y39G10AR.18a 2400616 2400768 -1
CDS:Y39G10AR.18a 2401009 2401138 -1
CDS:Y39G10AR.18a 2401210 2401408 -1
CDS:Y39G10AR.18a 2401458 2401488 -1

1 Sequence

Length
2841

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.18a.1 Y39G10AR.18a.1 3343   I: 2382953-2401492