WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y23H5B.6a.1 Sequence Name  Y23H5B.6a.1
Length (nt)  2327   Chromosome Location  I: 2489976-2497381
Chromosome . Primary Identifier  I Chromosome Location . Start  2489976
Chromosome Location . End  2497381 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5B.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021277 ddx-10 Y23H5B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y23H5B.6a Y23H5B.6a 2199   I: 2489984-2490190

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5B.6a.1 2489976 2497381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4545   215   I: 2489976-2490190 Caenorhabditis elegans
Exon4546   621   I: 2490237-2490857 Caenorhabditis elegans
Exon4547   360   I: 2492608-2492967 Caenorhabditis elegans
Exon4548   417   I: 2494936-2495352 Caenorhabditis elegans
Exon4553   714   I: 2496668-2497381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5B.6a.1 2489976 2497381 1

1 Sequence

Length
2327

1 Sequence Ontology Term

Identifier Name Description
transcript