WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y23H5B.6a Sequence Name  Y23H5B.6a
Length (nt)  2199   Chromosome Location  I: 2489984-2490190
Chromosome . Primary Identifier  I Chromosome Location . Start  2489984
Chromosome Location . End  2490190
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5B.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25231 DDX-10, isoform a 82.5 732 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00055710
WBRNAi00055711
WBRNAi00073343
WBRNAi00073345
WBRNAi00102184
WBRNAi00036724
WBRNAi00061660
WBRNAi00116637
WBRNAi00075476
WBRNAi00073344

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y23H5B.6a 2489984 2490190 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021277 ddx-10 Y23H5B.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y23H5B.6a 2489984 2490190 1
CDS:Y23H5B.6a 2490237 2490857 1
CDS:Y23H5B.6a 2492608 2492967 1
CDS:Y23H5B.6a 2494936 2495352 1
CDS:Y23H5B.6a 2496668 2497261 1

1 Sequence

Length
2199

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y23H5B.6a.1 Y23H5B.6a.1 2327   I: 2489976-2497381