WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71F9AL.18a Sequence Name  Y71F9AL.18a
Length (nt)  2838   Chromosome Location  I: 2907857-2907935
Chromosome . Primary Identifier  I Chromosome Location . Start  2907857
Chromosome Location . End  2907935
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.18a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25556 PARP-1, isoform a 108.0 945 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00038604
WBRNAi00058155
WBRNAi00004791
WBRNAi00009517
WBRNAi00107942
WBRNAi00064124

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.18a 2907857 2907935 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004049 parp-1 Y71F9AL.18 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.18a 2907857 2907935 -1
CDS:Y71F9AL.18a 2907982 2908235 -1
CDS:Y71F9AL.18a 2910381 2910596 -1
CDS:Y71F9AL.18a 2911987 2912223 -1
CDS:Y71F9AL.18a 2913775 2914107 -1
CDS:Y71F9AL.18a 2919515 2919719 -1
CDS:Y71F9AL.18a 2921373 2921950 -1
CDS:Y71F9AL.18a 2923045 2923167 -1
CDS:Y71F9AL.18a 2923817 2924536 -1
CDS:Y71F9AL.18a 2924602 2924694 -1

1 Sequence

Length
2838

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AL.18a.2 Y71F9AL.18a.2 3101   I: 2907725-2925529
Transcript:Y71F9AL.18a.1 Y71F9AL.18a.1 2984   I: 2907730-2924713