WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10BR.8 Sequence Name  Y54E10BR.8
Length (nt)  1260   Chromosome Location  I: 3052128-3052168
Chromosome . Primary Identifier  I Chromosome Location . Start  3052128
Chromosome Location . End  3052168
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BR.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27284 ZTF-23 48.1 419 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00057366
WBRNAi00004735
WBRNAi00037462
WBRNAi00092045
WBRNAi00111236
WBRNAi00001276

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.8 3052128 3052168 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021846 ztf-23 Y54E10BR.8 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.8 3052128 3052168 -1
CDS:Y54E10BR.8 3053469 3053541 -1
CDS:Y54E10BR.8 3053619 3053702 -1
CDS:Y54E10BR.8 3055314 3055598 -1
CDS:Y54E10BR.8 3057177 3057275 -1
CDS:Y54E10BR.8 3057338 3057424 -1
CDS:Y54E10BR.8 3057478 3057617 -1
CDS:Y54E10BR.8 3058394 3058463 -1
CDS:Y54E10BR.8 3058518 3058574 -1
CDS:Y54E10BR.8 3058638 3058769 -1
CDS:Y54E10BR.8 3058834 3058973 -1
CDS:Y54E10BR.8 3059020 3059071 -1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10BR.8.1 Y54E10BR.8.1 1434   I: 3052048-3059165