WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.12 Sequence Name  Y47G6A.12
Length (nt)  3789   Chromosome Location  I: 3433300-3433963
Chromosome . Primary Identifier  I Chromosome Location . Start  3433300
Chromosome Location . End  3433963
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22098 SEP-1 144.1 1262 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00082050
WBRNAi00110630
WBRNAi00026731
WBRNAi00066694
WBRNAi00085843
WBRNAi00082048
WBRNAi00089526
WBRNAi00089527
WBRNAi00078454
WBRNAi00087692
WBRNAi00037183
WBRNAi00022484
WBRNAi00022915
WBRNAi00022916
WBRNAi00056799
WBRNAi00026732
WBRNAi00082049
WBRNAi00087518
WBRNAi00022926
WBRNAi00110624

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.12 3433300 3433963 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004775 sep-1 Y47G6A.12 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.12 3433300 3433963 -1
CDS:Y47G6A.12 3434016 3434111 -1
CDS:Y47G6A.12 3434162 3434340 -1
CDS:Y47G6A.12 3434695 3435589 -1
CDS:Y47G6A.12 3435640 3435941 -1
CDS:Y47G6A.12 3435993 3436115 -1
CDS:Y47G6A.12 3436165 3436390 -1
CDS:Y47G6A.12 3437123 3437522 -1
CDS:Y47G6A.12 3437580 3437739 -1
CDS:Y47G6A.12 3437790 3438533 -1

1 Sequence

Length
3789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.12.1 Y47G6A.12.1 3941   I: 3433158-3438543