WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.18.2 Sequence Name  Y47G6A.18.2
Length (nt)  931   Chromosome Location  I: 3509698-3512733
Chromosome . Primary Identifier  I Chromosome Location . Start  3509698
Chromosome Location . End  3512733 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.18.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021644 Y47G6A.18 Y47G6A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.18 Y47G6A.18 843   I: 3509712-3509819

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.18.2 3509698 3512733 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7072   122   I: 3509698-3509819 Caenorhabditis elegans
Exon7075   429   I: 3510292-3510720 Caenorhabditis elegans
Exon7077   261   I: 3511187-3511447 Caenorhabditis elegans
Exon7079   119   I: 3512615-3512733 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.18.2 3509698 3512733 -1

1 Sequence

Length
931

1 Sequence Ontology Term

Identifier Name Description
transcript