WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.18 Sequence Name  Y47G6A.18
Length (nt)  843   Chromosome Location  I: 3509712-3509819
Chromosome . Primary Identifier  I Chromosome Location . Start  3509712
Chromosome Location . End  3509819
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.18

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22101 Y47G6A.18 31.9 280 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00070548
WBRNAi00026733
WBRNAi00026734
WBRNAi00056808
WBRNAi00004647
WBRNAi00033247
WBRNAi00080567
WBRNAi00117104
WBRNAi00070546
WBRNAi00070545
WBRNAi00070547

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.18 3509712 3509819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021644 Y47G6A.18 Y47G6A.18 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.18 3509712 3509819 -1
CDS:Y47G6A.18 3510292 3510720 -1
CDS:Y47G6A.18 3511187 3511447 -1
CDS:Y47G6A.18 3512615 3512659 -1

1 Sequence

Length
843

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.18.1 Y47G6A.18.1 1470   I: 3508398-3512733
Transcript:Y47G6A.18.2 Y47G6A.18.2 931   I: 3509698-3512733