WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.4.1 Sequence Name  Y47G6A.4.1
Length (nt)  2097   Chromosome Location  I: 3547071-3552005
Chromosome . Primary Identifier  I Chromosome Location . Start  3547071
Chromosome Location . End  3552005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021634 rde-10 Y47G6A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.4 Y47G6A.4 1884   I: 3547128-3547165

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.4.1 3547071 3552005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7192   95   I: 3547071-3547165 Caenorhabditis elegans
Exon7193   138   I: 3547212-3547349 Caenorhabditis elegans
Exon7194   76   I: 3547409-3547484 Caenorhabditis elegans
Exon7195   75   I: 3547539-3547613 Caenorhabditis elegans
Exon7196   484   I: 3548382-3548865 Caenorhabditis elegans
Exon7197   424   I: 3549600-3550023 Caenorhabditis elegans
Exon7198   111   I: 3550069-3550179 Caenorhabditis elegans
Exon7199   200   I: 3551149-3551348 Caenorhabditis elegans
Exon7200   181   I: 3551421-3551601 Caenorhabditis elegans
Exon7201   135   I: 3551645-3551779 Caenorhabditis elegans
Exon7202   178   I: 3551828-3552005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.4.1 3547071 3552005 1

1 Sequence

Length
2097

1 Sequence Ontology Term

Identifier Name Description
transcript