WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.4 Sequence Name  Y47G6A.4
Length (nt)  1884   Chromosome Location  I: 3547128-3547165
Chromosome . Primary Identifier  I Chromosome Location . Start  3547128
Chromosome Location . End  3547165
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24371 RDE-10 72.1 627 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00056821
WBRNAi00004643
WBRNAi00037193
WBRNAi00062438

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y47G6A.4 3547128 3547165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021634 rde-10 Y47G6A.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y47G6A.4 3547128 3547165 1
CDS:Y47G6A.4 3547212 3547349 1
CDS:Y47G6A.4 3547409 3547484 1
CDS:Y47G6A.4 3547539 3547613 1
CDS:Y47G6A.4 3548382 3548865 1
CDS:Y47G6A.4 3549600 3550023 1
CDS:Y47G6A.4 3550069 3550179 1
CDS:Y47G6A.4 3551149 3551348 1
CDS:Y47G6A.4 3551421 3551601 1
CDS:Y47G6A.4 3551645 3551779 1
CDS:Y47G6A.4 3551828 3551849 1

1 Sequence

Length
1884

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.4.1 Y47G6A.4.1 2097   I: 3547071-3552005