WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.2.2 Sequence Name  Y47G6A.2.2
Length (nt)  1537   Chromosome Location  I: 3608609-3611844
Chromosome . Primary Identifier  I Chromosome Location . Start  3608609
Chromosome Location . End  3611844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002144 inx-22 Y47G6A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.2 Y47G6A.2 1389   I: 3608616-3608869

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.2.2 3608609 3611844 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7382   261   I: 3608609-3608869 Caenorhabditis elegans
Exon7385   430   I: 3608923-3609352 Caenorhabditis elegans
Exon7387   87   I: 3609402-3609488 Caenorhabditis elegans
Exon7389   467   I: 3610126-3610592 Caenorhabditis elegans
Exon7391   79   I: 3611506-3611584 Caenorhabditis elegans
Exon7393   213   I: 3611632-3611844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.2.2 3608609 3611844 1

1 Sequence

Length
1537

1 Sequence Ontology Term

Identifier Name Description
transcript