WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.2 Sequence Name  Y47G6A.2
Length (nt)  1389   Chromosome Location  I: 3608616-3608869
Chromosome . Primary Identifier  I Chromosome Location . Start  3608616
Chromosome Location . End  3608869
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39849 INX-22 53.4 462 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00056810
WBRNAi00004628
WBRNAi00037187
WBRNAi00083397
WBRNAi00083380
WBRNAi00083412
WBRNAi00087924
WBRNAi00087926
WBRNAi00083421
WBRNAi00086482

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.2 3608616 3608869 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002144 inx-22 Y47G6A.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.2 3608616 3608869 1
CDS:Y47G6A.2 3608923 3609352 1
CDS:Y47G6A.2 3609402 3609488 1
CDS:Y47G6A.2 3610126 3610592 1
CDS:Y47G6A.2 3611506 3611584 1
CDS:Y47G6A.2 3611632 3611703 1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.2.1 Y47G6A.2.1 1567   I: 3608518-3611829
Transcript:Y47G6A.2.2 Y47G6A.2.2 1537   I: 3608609-3611844