WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12F5.4 Sequence Name  T12F5.4
Length (nt)  3939   Chromosome Location  I: 3713764-3713949
Chromosome . Primary Identifier  I Chromosome Location . Start  3713764
Chromosome Location . End  3713949
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12F5.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13601 LIN-59 147.6 1312 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00066060
WBRNAi00053223
WBRNAi00026283
WBRNAi00026284
WBRNAi00099862
WBRNAi00064683
WBRNAi00004211
WBRNAi00113507
WBRNAi00084979
WBRNAi00070958
WBRNAi00099256
WBRNAi00099660
WBRNAi00099458
WBRNAi00064837
WBRNAi00091525
WBRNAi00066609
WBRNAi00084125
WBRNAi00084124
WBRNAi00091477

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12F5.4 3713764 3713949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003040 lin-59 T12F5.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12F5.4 3713764 3713949 -1
CDS:T12F5.4 3714342 3715256 -1
CDS:T12F5.4 3715646 3715814 -1
CDS:T12F5.4 3715864 3717302 -1
CDS:T12F5.4 3717357 3717882 -1
CDS:T12F5.4 3718255 3718580 -1
CDS:T12F5.4 3718844 3719164 -1
CDS:T12F5.4 3721004 3721060 -1

1 Sequence

Length
3939

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12F5.4.1 T12F5.4.1 4351   I: 3713449-3721157