WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32E8.11.1 Sequence Name  C32E8.11.1
Length (nt)  6633   Chromosome Location  I: 3807456-3816809
Chromosome . Primary Identifier  I Chromosome Location . Start  3807456
Chromosome Location . End  3816809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32E8.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016326 ubr-1 C32E8.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32E8.11 C32E8.11 6177   I: 3807899-3808142

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32E8.11.1 3807456 3816809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7805   687   I: 3807456-3808142 Caenorhabditis elegans
Exon7806   74   I: 3808655-3808728 Caenorhabditis elegans
Exon7807   591   I: 3808793-3809383 Caenorhabditis elegans
Exon7808   156   I: 3809437-3809592 Caenorhabditis elegans
Exon7809   471   I: 3809639-3810109 Caenorhabditis elegans
Exon7810   580   I: 3810663-3811242 Caenorhabditis elegans
Exon7811   171   I: 3811461-3811631 Caenorhabditis elegans
Exon7812   159   I: 3811680-3811838 Caenorhabditis elegans
Exon7813   774   I: 3811896-3812669 Caenorhabditis elegans
Exon7814   224   I: 3812718-3812941 Caenorhabditis elegans
Exon7815   762   I: 3813282-3814043 Caenorhabditis elegans
Exon7816   329   I: 3814093-3814421 Caenorhabditis elegans
Exon7817   642   I: 3814779-3815420 Caenorhabditis elegans
Exon7818   292   I: 3815480-3815771 Caenorhabditis elegans
Exon7819   303   I: 3815829-3816131 Caenorhabditis elegans
Exon7820   251   I: 3816338-3816588 Caenorhabditis elegans
Exon7821   167   I: 3816643-3816809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32E8.11.1 3807456 3816809 -1

1 Sequence

Length
6633

1 Sequence Ontology Term

Identifier Name Description
transcript