WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C32E8.11 Sequence Name  C32E8.11
Length (nt)  6177   Chromosome Location  I: 3807899-3808142
Chromosome . Primary Identifier  I Chromosome Location . Start  3807899
Chromosome Location . End  3808142
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32E8.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40441 UBR-1 232.8 2058 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00041686
WBRNAi00003055
WBRNAi00064450
WBRNAi00116515

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C32E8.11 3807899 3808142 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016326 ubr-1 C32E8.11 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C32E8.11 3807899 3808142 -1
CDS:C32E8.11 3808655 3808728 -1
CDS:C32E8.11 3808793 3809383 -1
CDS:C32E8.11 3809437 3809592 -1
CDS:C32E8.11 3809639 3810109 -1
CDS:C32E8.11 3810663 3811242 -1
CDS:C32E8.11 3811461 3811631 -1
CDS:C32E8.11 3811680 3811838 -1
CDS:C32E8.11 3811896 3812669 -1
CDS:C32E8.11 3812718 3812941 -1
CDS:C32E8.11 3813282 3814043 -1
CDS:C32E8.11 3814093 3814421 -1
CDS:C32E8.11 3814779 3815420 -1
CDS:C32E8.11 3815480 3815771 -1
CDS:C32E8.11 3815829 3816131 -1
CDS:C32E8.11 3816338 3816588 -1
CDS:C32E8.11 3816643 3816796 -1

1 Sequence

Length
6177

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C32E8.11.1 C32E8.11.1 6633   I: 3807456-3816809