WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03F1.1.2 Sequence Name  T03F1.1.2
Length (nt)  1649   Chromosome Location  I: 3873444-3875997
Chromosome . Primary Identifier  I Chromosome Location . Start  3873444
Chromosome Location . End  3875997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F1.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020184 uba-5 T03F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03F1.1 T03F1.1 1260   I: 3874371-3874810

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03F1.1.2 3873444 3875997 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7968   113   I: 3873444-3873556 Caenorhabditis elegans
Exon7970   446   I: 3874365-3874810 Caenorhabditis elegans
Exon7974   274   I: 3874859-3875132 Caenorhabditis elegans
Exon7978   816   I: 3875182-3875997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03F1.1.2 3873444 3875997 1

1 Sequence

Length
1649

1 Sequence Ontology Term

Identifier Name Description
transcript